STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI93074.1L-glutamate-binding protein /L-aspartate-binding protein. (302 aa)    
Predicted Functional Partners:
SFI93114.1
L-glutamate ABC transporter membrane protein.
 
 0.985
SFI93094.1
L-glutamate ABC transporter membrane protein.
 
 0.980
SFI93130.1
L-glutamate ABC transporter ATP-binding protein.
 0.942
SFI42338.1
Amino acid ABC transporter membrane protein, PAAT family.
 
 0.824
SFI69662.1
PAS domain S-box-containing protein.
   
 0.779
SFI42322.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.764
SFI79322.1
Chorismate mutase.
    
 0.749
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.743
SFI61424.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.734
SFI61405.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
 0.733
Your Current Organism:
Pseudomonas argentinensis
NCBI taxonomy Id: 289370
Other names: CCUG 50743, CECT 7010, LMG 22563, LMG:22563, P. argentinensis, Pseudomonas argentinae, Pseudomonas argentinensis Peix et al. 2005, Pseudomonas sp. M7C2, strain CH01
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