Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI22157.1 | SFI30775.1 | SAMN05216602_0050 | SAMN05216602_0616 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.954 |
SFI22157.1 | SFI73572.1 | SAMN05216602_0050 | SAMN05216602_2592 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Anthranilate 1,2-dioxygenase reductase subunit. | 0.942 |
SFI22157.1 | SFJ15550.1 | SAMN05216602_0050 | SAMN05216602_4154 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.968 |
SFI22157.1 | SFJ15589.1 | SAMN05216602_0050 | SAMN05216602_4156 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Uncharacterized domain 1-containing protein. | 0.769 |
SFI22157.1 | SFJ21775.1 | SAMN05216602_0050 | SAMN05216602_4350 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Vanillate O-demethylase ferredoxin subunit. | 0.953 |
SFI22157.1 | SFJ28112.1 | SAMN05216602_0050 | SAMN05216602_4569 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Ferredoxin-NADP reductase. | 0.942 |
SFI22157.1 | SFJ30317.1 | SAMN05216602_0050 | SAMN05216602_4665 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.644 |
SFI22157.1 | gpsA | SAMN05216602_0050 | SAMN05216602_4159 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.903 |
SFI30775.1 | SFI22157.1 | SAMN05216602_0616 | SAMN05216602_0050 | Hypothetical protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.954 |
SFI30775.1 | SFI73572.1 | SAMN05216602_0616 | SAMN05216602_2592 | Hypothetical protein. | Anthranilate 1,2-dioxygenase reductase subunit. | 0.683 |
SFI30775.1 | SFJ15589.1 | SAMN05216602_0616 | SAMN05216602_4156 | Hypothetical protein. | Uncharacterized domain 1-containing protein. | 0.739 |
SFI30775.1 | SFJ21775.1 | SAMN05216602_0616 | SAMN05216602_4350 | Hypothetical protein. | Vanillate O-demethylase ferredoxin subunit. | 0.657 |
SFI30775.1 | SFJ28112.1 | SAMN05216602_0616 | SAMN05216602_4569 | Hypothetical protein. | Ferredoxin-NADP reductase. | 0.712 |
SFI73572.1 | SFI22157.1 | SAMN05216602_2592 | SAMN05216602_0050 | Anthranilate 1,2-dioxygenase reductase subunit. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.942 |
SFI73572.1 | SFI30775.1 | SAMN05216602_2592 | SAMN05216602_0616 | Anthranilate 1,2-dioxygenase reductase subunit. | Hypothetical protein. | 0.683 |
SFI73572.1 | SFJ15589.1 | SAMN05216602_2592 | SAMN05216602_4156 | Anthranilate 1,2-dioxygenase reductase subunit. | Uncharacterized domain 1-containing protein. | 0.728 |
SFI73572.1 | SFJ21775.1 | SAMN05216602_2592 | SAMN05216602_4350 | Anthranilate 1,2-dioxygenase reductase subunit. | Vanillate O-demethylase ferredoxin subunit. | 0.617 |
SFI73572.1 | SFJ28112.1 | SAMN05216602_2592 | SAMN05216602_4569 | Anthranilate 1,2-dioxygenase reductase subunit. | Ferredoxin-NADP reductase. | 0.600 |
SFJ15550.1 | SFI22157.1 | SAMN05216602_4154 | SAMN05216602_0050 | Pimeloyl-ACP methyl ester carboxylesterase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.968 |
SFJ15550.1 | SFJ15589.1 | SAMN05216602_4154 | SAMN05216602_4156 | Pimeloyl-ACP methyl ester carboxylesterase. | Uncharacterized domain 1-containing protein. | 0.652 |
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