STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI20527.1Hypothetical protein; Identified by glimmer; putative. (183 aa)    
Predicted Functional Partners:
ACI21221.1
Hypothetical protein; Identified by glimmer; putative.
       0.701
ACI20534.1
Hypothetical protein; Identified by glimmer; putative.
       0.701
ACI21465.1
Hypothetical protein; Identified by glimmer; putative.
       0.701
ACI20981.1
Type II protein secretion protein-like protein; Identified by match to protein family HMM PF00263; match to protein family HMM TIGR02519; Belongs to the bacterial secretin family.
       0.701
ACI21735.1
Type IV pilin; Identified by match to protein family HMM PF00437; match to protein family HMM PF05157.
       0.701
ACI21244.1
Pilin secretion/fimbrial assembly system protein, PilC, putative; Identified by match to protein family HMM PF00482.
       0.701
ACI22086.1
General secretion pathway protein A.
       0.701
ribBA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
       0.481
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.