Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACI20399.1 | ACI20760.1 | THEYE_A0306 | THEYE_A0308 | Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Hypothetical protein; Identified by glimmer; putative. | 0.631 |
| ACI20399.1 | ACI21533.1 | THEYE_A0306 | THEYE_A0307 | Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Conserved hypothetical protein. | 0.703 |
| ACI20399.1 | polA | THEYE_A0306 | THEYE_A1487 | Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | DNA polymerase I, thermostable; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.531 |
| ACI20399.1 | topA | THEYE_A0306 | THEYE_A1066 | Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.527 |
| ACI20760.1 | ACI20399.1 | THEYE_A0308 | THEYE_A0306 | Hypothetical protein; Identified by glimmer; putative. | Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.631 |
| ACI20760.1 | ACI21533.1 | THEYE_A0308 | THEYE_A0307 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein. | 0.714 |
| ACI21410.1 | ACI21533.1 | THEYE_A0975 | THEYE_A0307 | TPR domain protein. | Conserved hypothetical protein. | 0.487 |
| ACI21410.1 | polA | THEYE_A0975 | THEYE_A1487 | TPR domain protein. | DNA polymerase I, thermostable; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.643 |
| ACI21410.1 | topA | THEYE_A0975 | THEYE_A1066 | TPR domain protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.738 |
| ACI21533.1 | ACI20399.1 | THEYE_A0307 | THEYE_A0306 | Conserved hypothetical protein. | Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.703 |
| ACI21533.1 | ACI20760.1 | THEYE_A0307 | THEYE_A0308 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.714 |
| ACI21533.1 | ACI21410.1 | THEYE_A0307 | THEYE_A0975 | Conserved hypothetical protein. | TPR domain protein. | 0.487 |
| ACI21533.1 | ACI21764.1 | THEYE_A0307 | THEYE_A1887 | Conserved hypothetical protein. | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. | 0.734 |
| ACI21533.1 | ACI22119.1 | THEYE_A0307 | THEYE_A1990 | Conserved hypothetical protein. | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. | 0.734 |
| ACI21533.1 | gidB | THEYE_A0307 | THEYE_A0584 | Conserved hypothetical protein. | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.719 |
| ACI21533.1 | polA | THEYE_A0307 | THEYE_A1487 | Conserved hypothetical protein. | DNA polymerase I, thermostable; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.450 |
| ACI21533.1 | topA | THEYE_A0307 | THEYE_A1066 | Conserved hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.517 |
| ACI21764.1 | ACI21533.1 | THEYE_A1887 | THEYE_A0307 | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. | Conserved hypothetical protein. | 0.734 |
| ACI21764.1 | topA | THEYE_A1887 | THEYE_A1066 | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.534 |
| ACI22119.1 | ACI21533.1 | THEYE_A1990 | THEYE_A0307 | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. | Conserved hypothetical protein. | 0.734 |
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