STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21991.1Hypothetical protein; Identified by glimmer; putative. (356 aa)    
Predicted Functional Partners:
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
       0.776
ACI20285.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ACI20595.1
CDP-tyvelose epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370.
       0.768
ACI21183.1
Hypothetical protein; Identified by glimmer; putative.
       0.741
ACI21188.1
UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350.
       0.727
ACI22033.1
CMP-NeuNAc synthetase; Identified by match to protein family HMM PF03102; match to protein family HMM PF08666.
       0.726
ACI20835.1
Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993.
       0.717
ACI21426.1
Putative CDP tyvulose epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
       0.717
ACI21451.1
Hypothetical protein; Identified by glimmer; putative.
       0.707
ACI20618.1
CBS domain pair, putative; Identified by match to protein family HMM PF00571.
       0.706
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.