STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21073.1Hypothetical protein; Identified by glimmer; putative. (599 aa)    
Predicted Functional Partners:
ACI20618.1
CBS domain pair, putative; Identified by match to protein family HMM PF00571.
       0.773
ACI21052.1
N-acylneuraminate cytidylyltransferase; Identified by match to protein family HMM PF02348.
       0.773
ACI21451.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
asnB
Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536.
       0.773
ACI20780.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ACI21875.1
Glycosyl transferase, group 1/2 family protein; Identified by match to protein family HMM PF00534.
       0.773
ACI20752.1
Glycosyltransferase involved in cell wall biogenesis; Identified by match to protein family HMM PF00535.
       0.773
ACI22004.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ACI21994.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ACI22033.1
CMP-NeuNAc synthetase; Identified by match to protein family HMM PF03102; match to protein family HMM PF08666.
       0.752
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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