STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21932.1ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (236 aa)    
Predicted Functional Partners:
ACI21922.1
ATPase component ABC-type multidrug transport system; Identified by match to protein family HMM PF01061.
 
  
 0.927
ACI20968.1
ATPase component ABC-type multidrug transport system; Identified by match to protein family HMM PF01061.
 
  
 0.927
ACI20797.1
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
 
  
 0.853
ACI20315.1
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
 
  
 0.853
ACI20646.1
Sensor histidine kinase, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
   
   0.778
ACI21968.1
Conserved hypothetical protein.
       0.773
ACI21615.1
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
       0.773
ACI20926.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ACI21800.1
Heme exporter protein B, putative; Identified by match to protein family HMM PF01061.
       0.773
ACI20860.1
ABC transporter, ATP-binding protein, MsbA family; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
0.764
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
Server load: low (16%) [HD]