STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI20282.1Conserved hypothetical protein. (96 aa)    
Predicted Functional Partners:
ACI21682.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ACI21060.1
ATP-dependent protease La 1; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362; match to protein family HMM PF07728.
       0.521
ACI21447.1
Membrane protein, putative; Identified by match to protein family HMM PF01925.
       0.438
ACI20351.1
Universal stress protein, putative; Identified by match to protein family HMM PF00582.
       0.402
ACI20580.1
Hypothetical protein; Identified by glimmer; putative.
       0.402
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.