STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI22080.1Conserved hypothetical protein; Identified by match to protein family HMM PF09335. (203 aa)    
Predicted Functional Partners:
ACI21141.1
Pyruvate synthase subunit PorC; Identified by match to protein family HMM PF01558; match to protein family HMM TIGR02175.
       0.601
ACI21578.1
Pyruvate synthase subunit PorD; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR02179.
       0.601
ACI20992.1
Pyruvate synthase subunit PorA; Identified by match to protein family HMM PF01855.
       0.601
ACI20888.1
Pyruvate synthase subunit PorB; Identified by match to protein family HMM PF02775.
       0.601
ACI21015.1
GTP-dependent nucleic acid-binding protein EngD; Identified by match to protein family HMM PF01926; match to protein family HMM PF06071.
       0.509
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
       0.493
ACI22085.1
Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.
       0.492
tatB
Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.490
ACI21336.1
Hypothetical protein; Identified by glimmer; putative.
       0.483
ACI20631.1
Hypothetical protein; Identified by glimmer; putative.
       0.460
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.