STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI20650.1Flavoprotein WrbA, protein; Identified by match to protein family HMM PF00258; match to protein family HMM PF03358; Belongs to the WrbA family. (202 aa)    
Predicted Functional Partners:
ACI21619.1
Identified by match to protein family HMM PF00258; match to protein family HMM PF03358.
  
  
 
0.921
menG
Menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
ACI22094.1
Endoribonuclease L-PSP; Identified by match to protein family HMM PF01042.
 
 
    0.900
ACI21926.1
Cytochrome c family protein.
       0.623
ACI21598.1
Putative sulfur transferase, selenocysteine-containing protein; Selenoprotein. identified by similarity to GB:AAR34257.1.
  
    0.508
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
Server load: low (26%) [HD]