STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21926.1Cytochrome c family protein. (628 aa)    
Predicted Functional Partners:
ACI21586.1
Quinol oxidase; Identified by match to protein family HMM TIGR03153.
  
 
 0.690
ACI21272.1
Cytochrome c family protein, putative.
  
 
 0.690
ACI21598.1
Putative sulfur transferase, selenocysteine-containing protein; Selenoprotein. identified by similarity to GB:AAR34257.1.
     
 0.660
ACI20650.1
Flavoprotein WrbA, protein; Identified by match to protein family HMM PF00258; match to protein family HMM PF03358; Belongs to the WrbA family.
       0.623
ACI21823.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00581.
       0.417
ACI20726.1
Putative protein.
       0.405
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.