STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21047.1TonB-dependent receptor-related protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. (654 aa)    
Predicted Functional Partners:
ACI21901.1
Hypothetical protein; Identified by glimmer; putative.
    
 
 0.794
ACI20577.1
Hypothetical protein; Identified by glimmer; putative.
    
 
 0.794
ACI22185.1
Domain of unknown function, putative; Identified by match to protein family HMM PF01902; match to protein family HMM TIGR00290.
       0.773
ACI20870.1
iron(III) ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.698
ACI20982.1
ABC-type Fe3+-siderophores transport system, periplasmic component, putative; Identified by match to protein family HMM PF01497.
 
  
 0.684
ACI22123.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
 
  
 0.641
ACI20429.1
TonB domain protein, putative; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 0.589
ACI21720.1
Iron ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  
 0.586
ACI21181.1
Hypothetical protein; Identified by glimmer; putative.
       0.508
ACI20912.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.458
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.