STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21213.1Lipoprotein, putative. (176 aa)    
Predicted Functional Partners:
leuS
leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.774
ACI21007.1
Conserved hypothetical protein.
       0.773
ACI20578.1
Conserved hypothetical protein.
       0.773
ACI21908.1
Conserved hypothetical protein.
       0.773
ACI20414.1
Protein of unknown function; Identified by match to protein family HMM PF01934.
       0.773
ACI21029.1
DNA polymerase III, delta subunit superfamily; Identified by match to protein family HMM PF06144.
       0.773
ACI20421.1
Nucleotidyltransferase; Identified by match to protein family HMM PF01909.
       0.709
ACI21190.1
Mosc domain protein; Identified by match to protein family HMM PF03473.
       0.601
ACI20575.1
Molybdopterin biosynthesis mog protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.601
ACI21678.1
C-type cytochrome biogenesis protein; Identified by match to protein family HMM PF02683.
       0.601
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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