STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI20615.1Amidohydrolase family protein, putative; Identified by match to protein family HMM PF04909. (264 aa)    
Predicted Functional Partners:
yihY
Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765.
  
    0.816
thiD
Phosphomethylpyrimidine kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097.
       0.773
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family.
       0.746
ACI21301.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Identified by match to protein family HMM PF01676; match to protein family HMM TIGR00306.
       0.565
ACI22138.1
Bacterial Peptidase A24 N-terminal domain family; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
       0.538
ACI21045.1
Hypothetical protein; Identified by glimmer; putative.
       0.538
ACI20417.1
Deoxyribonuclease, TatD family; Identified by match to protein family HMM PF01026; match to protein family HMM PF04055; match to protein family HMM TIGR00010.
       0.538
ACI21346.1
Oxidoreductase; Identified by match to protein family HMM PF00107; match to protein family HMM PF01408; match to protein family HMM PF08240.
  
  
 0.530
ACI20492.1
ACT domain protein; Identified by match to protein family HMM PF01842.
  
     0.498
ACI21202.1
Acetolactate synthase small subunit; Identified by match to protein family HMM PF01842.
  
     0.458
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.