Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACI20739.1 | ACI22051.1 | THEYE_A1296 | THEYE_A1293 | LysM domain protein; Identified by match to protein family HMM PF03734. | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | 0.427 |
ACI21209.1 | ACI22051.1 | THEYE_A0338 | THEYE_A1293 | Identified by match to protein family HMM PF01875; Belongs to the MEMO1 family. | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | 0.989 |
ACI21209.1 | ACI22054.1 | THEYE_A0338 | THEYE_A0925 | Identified by match to protein family HMM PF01875; Belongs to the MEMO1 family. | Identified by match to protein family HMM PF04055. | 0.979 |
ACI22051.1 | ACI20739.1 | THEYE_A1293 | THEYE_A1296 | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | LysM domain protein; Identified by match to protein family HMM PF03734. | 0.427 |
ACI22051.1 | ACI21209.1 | THEYE_A1293 | THEYE_A0338 | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | Identified by match to protein family HMM PF01875; Belongs to the MEMO1 family. | 0.989 |
ACI22051.1 | ACI22054.1 | THEYE_A1293 | THEYE_A0925 | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | Identified by match to protein family HMM PF04055. | 0.807 |
ACI22051.1 | nnr | THEYE_A1293 | THEYE_A0332 | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity). In the N-terminal section; belongs to the NnrE/AIBP family. | 0.427 |
ACI22054.1 | ACI21209.1 | THEYE_A0925 | THEYE_A0338 | Identified by match to protein family HMM PF04055. | Identified by match to protein family HMM PF01875; Belongs to the MEMO1 family. | 0.979 |
ACI22054.1 | ACI22051.1 | THEYE_A0925 | THEYE_A1293 | Identified by match to protein family HMM PF04055. | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | 0.807 |
nnr | ACI22051.1 | THEYE_A0332 | THEYE_A1293 | YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity). In the N-terminal section; belongs to the NnrE/AIBP family. | Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296. | 0.427 |