STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21755.1CoB--CoM heterodisulfide reductase iron-sulfur subunit A, selenocysteine-containing; Selenoprotein. (666 aa)    
Predicted Functional Partners:
vhuD
Methyl viologen-reducing hydrogenase, subunit delta; Identified by match to protein family HMM PF02662.
 0.999
ACI21580.1
CoB--CoM heterodisulfide reductase subunit B; Identified by match to protein family HMM PF02754.
 
 0.998
ACI21805.1
Heterodisulfide reductase subunit C.
 
 0.994
ACI22087.1
F420-non-reducing hydrogenase vhc iron-sulfur subunit D; Identified by match to protein family HMM PF02662.
 
 0.992
ACI21218.1
F420-non-reducing hydrogenase subunit G; Identified by match to protein family HMM PF01058.
 
 0.991
ACI21055.1
F420-non-reducing hydrogenase subunit A, selenocysteine-containing; Selenoprotein. identified by similarity to SP:Q58592.
 
 
 0.987
ACI20326.1
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02589; match to protein family HMM PF02754.
  
 
 0.938
ACI20309.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2, putative; Identified by match to protein family HMM PF00037.
  
  
 
0.917
ACI21545.1
Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF01493; match to protein family HMM PF07992.
  
 
 0.795
ACI20349.1
Heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta; Identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF02662; match to protein family HMM PF07992.
 
 
0.766
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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