Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACI20787.1 | ACI20792.1 | THEYE_A1460 | THEYE_A0756 | Conserved protein. | Peptidase propeptide and ypeb domain protein; Identified by match to protein family HMM PF03413. | 0.501 |
ACI20787.1 | truD | THEYE_A1460 | THEYE_A0547 | Conserved protein. | tRNA pseudouridine synthase D; Identified by match to protein family HMM PF01142. | 0.411 |
ACI20787.1 | uvrA2 | THEYE_A1460 | THEYE_A1461 | Conserved protein. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.558 |
ACI20792.1 | ACI20787.1 | THEYE_A0756 | THEYE_A1460 | Peptidase propeptide and ypeb domain protein; Identified by match to protein family HMM PF03413. | Conserved protein. | 0.501 |
truD | ACI20787.1 | THEYE_A0547 | THEYE_A1460 | tRNA pseudouridine synthase D; Identified by match to protein family HMM PF01142. | Conserved protein. | 0.411 |
uvrA2 | ACI20787.1 | THEYE_A1461 | THEYE_A1460 | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | Conserved protein. | 0.558 |