STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21013.1Conserved hypothetical protein. (283 aa)    
Predicted Functional Partners:
ACI20846.1
Conserved hypothetical protein.
 
    0.961
ACI20594.1
Conserved hypothetical protein.
 
    0.921
ACI21739.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
 
     0.910
ACI21704.1
Conserved hypothetical protein.
  
     0.640
ACI20761.1
Polysulfide reductase, subunit C, putative; Identified by match to protein family HMM PF03916.
  
     0.438
ACI22124.1
Chain A, Cytochrome C3 From Desulfomicrobium Baculatus; Identified by match to protein family HMM PF02085.
  
     0.435
ACI22017.1
Cytochrome c family protein.
  
     0.431
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.