STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI20430.1Electron transfer flavoprotein alpha-subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00766; match to protein family HMM PF01012. (393 aa)    
Predicted Functional Partners:
ACI21620.1
Electron transfer flavoprotein beta-subunit; Identified by match to protein family HMM PF01012.
 0.999
ACI21873.1
Electron transfer flavoprotein beta-subunit; Identified by match to protein family HMM PF01012.
 0.999
ACI21765.1
acyl-CoA dehydrogenase, short-chain specific; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
 0.997
mdh1
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.795
ACI21545.1
Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF01493; match to protein family HMM PF07992.
  
 
 0.790
fabD
Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.
       0.780
ACI21614.1
Lipoprotein, putative.
  
 
 0.776
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.725
ACI22193.1
Succinate dehydrogenase iron-sulfur protein; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
  
 0.689
ACI22150.1
Hydrogenase-1; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906; match to protein family HMM TIGR02512.
  
  
 0.688
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.