STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21903.1Identified by match to protein family HMM PF00582. (146 aa)    
Predicted Functional Partners:
ACI20741.1
Transcriptional regulator; Identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671.
       0.773
ACI21252.1
biotin-[acetyl-CoA-carboxylase] ligase; Identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121.
       0.773
ACI20608.1
Metal dependent hydrolase.
       0.773
ACI20584.1
Identified by match to protein family HMM PF00582.
  
     0.503
ACI21074.1
Universal stress protein family.
  
     0.483
ACI20598.1
Universal stress protein family.
  
     0.483
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
Server load: low (16%) [HD]