STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21069.1Ceramide glucosyltransferase, putative; Identified by match to protein family HMM PF00535. (390 aa)    
Predicted Functional Partners:
ACI21223.1
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
 
 0.921
ACI21300.1
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
 
 0.877
ACI21743.1
Xylanase/chitin deacetylase; Identified by match to protein family HMM PF01522.
  
  
 0.863
ACI21827.1
Tetratricopeptide repeat domain protein.
  
 
 0.836
ACI20253.1
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
 
 0.836
ACI21369.1
Tetratricopeptide repeat domain protein.
  
 
 0.793
ACI21205.1
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515.
  
 
 0.793
ACI20736.1
Tetratricopeptide repeat domain protein.
  
 
 0.793
ACI21945.1
PHP domain, putative; Identified by match to protein family HMM PF02811.
       0.773
ACI21075.1
Alkaline phosphatase; Identified by match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
       0.752
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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