STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21367.1Nitrogen assimilation sensor kinase. (67 aa)    
Predicted Functional Partners:
ACI20769.1
EAL domain, putative; Identified by match to protein family HMM PF00563.
       0.773
ACI21706.1
Identified by match to protein family HMM PF00571; match to protein family HMM PF00990.
       0.773
ACI21069.1
Ceramide glucosyltransferase, putative; Identified by match to protein family HMM PF00535.
       0.513
ACI21945.1
PHP domain, putative; Identified by match to protein family HMM PF02811.
       0.513
ACI21075.1
Alkaline phosphatase; Identified by match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
       0.500
ACI20308.1
Serine/threonine protein phosphatase.
       0.474
ACI21488.1
Regulatory components of sensory transduction system; Identified by match to protein family HMM PF00072.
       0.442
ACI20171.1
Sensory transduction histidine kinase; Identified by match to protein family HMM PF02518.
       0.427
ACI21065.1
Chain A, Beta-Glycosidase From Pyrococcus Horikoshii; Identified by match to protein family HMM PF00232; Belongs to the glycosyl hydrolase 1 family.
       0.427
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.