STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aprBAdenylylsulfate reductase, beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR02060. (142 aa)    
Predicted Functional Partners:
aprA
Adenylylsulfate reductase, alpha subunit; Identified by match to protein family HMM PF00890; match to protein family HMM TIGR02061.
 
 0.998
sat
Sulfate adenylyltransferase; Identified by match to protein family HMM PF01747; match to protein family HMM TIGR00339.
 
 
 0.993
dsrA
Sulfite reductase, dissimilatory-type alpha subunit; Identified by match to protein family HMM PF01077; match to protein family HMM TIGR02064.
  
 
 0.980
dsrB
Sulfite reductase, dissimilatory-type beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02066.
  
 
 0.979
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.910
ACI20349.1
Heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta; Identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF02662; match to protein family HMM PF07992.
 
  
 0.909
ACI21671.1
Identified by match to protein family HMM PF01368; match to protein family HMM PF02272.
     
  0.900
ACI20655.1
QmoC.
 
   
 0.888
ACI21394.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2; Identified by match to protein family HMM PF00037; match to protein family HMM PF07992.
 
  
 0.882
ACI20938.1
Lipoprotein, putative; Identified by match to protein family HMM PF03692.
  
     0.775
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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