STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI21636.1Hypothetical protein; Identified by glimmer; putative. (209 aa)    
Predicted Functional Partners:
ACI20324.1
ABC transporter permease protein; Identified by match to protein family HMM PF02405.
 
 0.993
ACI22181.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
 0.985
ACI21268.1
Toluene tolerance protein Ttg2B; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; Belongs to the MlaE permease family.
 
 0.969
ACI21026.1
Toluene tolerance protein Ttg2B; Identified by match to protein family HMM PF02405.
 
 0.969
ACI20639.1
ABC transporter substrate binding protein; Identified by match to protein family HMM PF02470.
 
 0.945
ACI20526.1
Identified by match to protein family HMM PF02470.
  
 0.938
ACI21366.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  
 
0.926
ACI21491.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
  
 
0.923
ACI21638.1
Toluene tolerance, Ttg2 superfamily; Identified by match to protein family HMM PF05494.
  
 
 0.845
ACI21205.1
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515.
       0.773
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
Server load: low (26%) [HD]