STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI22119.1Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. (256 aa)    
Predicted Functional Partners:
ACI22160.1
Stage 0 sporulation protein J; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.
 
 0.993
ACI21785.1
Conserved hypothetical protein.
  
    0.775
ACI20528.1
Homoserine dehydrogenase (HDH): ThrA, metL; Identified by match to protein family HMM PF00742; match to protein family HMM PF01408; match to protein family HMM PF01842; match to protein family HMM PF03447.
       0.773
ACI21690.1
Molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
       0.773
ACI20933.1
Penicillin-binding protein 1; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074.
       0.773
ACI21637.1
Hypothetical aminotransferase YfdZ; Identified by match to protein family HMM PF00155.
  
    0.763
ACI21533.1
Conserved hypothetical protein.
  
 
 0.734
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.699
ACI21161.1
NADH-dependent butanol dehydrogenase a; Identified by match to protein family HMM PF00465.
       0.699
ACI21722.1
Conserved domain protein; Identified by match to protein family HMM PF00313.
  
  
 0.585
Your Current Organism:
Thermodesulfovibrio yellowstonii
NCBI taxonomy Id: 289376
Other names: T. yellowstonii DSM 11347, Thermodesulfovibrio yellowstonii DSM 11347
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.