STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSV59052.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)    
Predicted Functional Partners:
ASU35_01660
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.907
KSV59056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.894
KSV59054.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
KSV59055.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
KSV58438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
KSV59053.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.732
ASU35_01720
LPD16 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
KSV58439.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
KSV59057.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
ASU35_16950
DDE_Tnp_1 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
Your Current Organism:
Acetivibrio ethanolgignens
NCBI taxonomy Id: 290052
Other names: A. ethanolgignens, ATCC 33324, Acetivibrio ethanoligignens, DSM 3005, LMG 7055, LMG:7055, strain 77-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.