STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSV57854.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1018 aa)    
Predicted Functional Partners:
KSV58551.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.919
KSV58206.1
Aldose epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.824
KSV60636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
  
  
0.808
KSV60635.1
Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.770
KSV57857.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.758
araD
Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.752
KSV59190.1
1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.735
KSV57967.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.730
KSV57467.1
6-phospho-alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.717
KSV57856.1
Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.684
Your Current Organism:
Acetivibrio ethanolgignens
NCBI taxonomy Id: 290052
Other names: A. ethanolgignens, ATCC 33324, Acetivibrio ethanoligignens, DSM 3005, LMG 7055, LMG:7055, strain 77-6
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