STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSV59773.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)    
Predicted Functional Partners:
KSV59774.1
RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.709
KSV59772.1
Butanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
KSV59778.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0342 family.
       0.551
KSV59776.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
KSV59775.1
Peptidase U32; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
KSV59777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
rnj
Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
    0.520
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
     
 0.510
KSV58852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.498
KSV58830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.485
Your Current Organism:
Acetivibrio ethanolgignens
NCBI taxonomy Id: 290052
Other names: A. ethanolgignens, ATCC 33324, Acetivibrio ethanoligignens, DSM 3005, LMG 7055, LMG:7055, strain 77-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.