STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSV58136.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)    
Predicted Functional Partners:
KSV60430.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.810
KSV60431.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KSV60435.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KSV60456.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KSV60432.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.720
KSV60455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.674
KSV57670.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
KSV60426.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
KSV58137.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.605
KSV58733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.591
Your Current Organism:
Acetivibrio ethanolgignens
NCBI taxonomy Id: 290052
Other names: A. ethanolgignens, ATCC 33324, Acetivibrio ethanoligignens, DSM 3005, LMG 7055, LMG:7055, strain 77-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.