STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ35908.1Fibronectin type III domain-containing protein. (426 aa)    
Predicted Functional Partners:
SJZ57107.1
Parallel beta-helix repeat (two copies).
 
  
  0.781
SJZ78169.1
Leucine rich repeat-containing protein.
  
     0.651
SJZ35627.1
Leucine rich repeat-containing protein.
  
     0.639
SJZ32625.1
Leucine rich repeat-containing protein.
  
     0.568
SJZ38963.1
Ribitol-5-phosphate 2-dehydrogenase; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate.
  
  
  0.552
SJZ61153.1
PPIC-type PPIASE domain-containing protein.
   
 
 0.551
SJZ83042.1
PPIC-type PPIASE domain-containing protein.
   
 
 0.551
SJZ42482.1
Leucine rich repeat-containing protein.
  
     0.531
SJZ39063.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
  
   0.521
SJZ38925.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
  
     0.513
Your Current Organism:
Eubacterium coprostanoligenes
NCBI taxonomy Id: 290054
Other names: ATCC 51222, E. coprostanoligenes, strain HL
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