STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ71281.1Large conductance mechanosensitive channel protein. (93 aa)    
Predicted Functional Partners:
SJZ71395.1
Large conductance mechanosensitive channel.
 
     0.844
SJZ71215.1
tRNA1(Val) A37 N6-methylase TrmN6.
       0.615
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.615
SJZ71258.1
Putative pyruvate formate lyase activating enzyme.
       0.615
SJZ71414.1
Lysophospholipase, alpha-beta hydrolase superfamily.
       0.561
SJZ71436.1
TatD DNase family protein.
       0.561
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
    0.465
Your Current Organism:
Eubacterium coprostanoligenes
NCBI taxonomy Id: 290054
Other names: ATCC 51222, E. coprostanoligenes, strain HL
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