STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001028025_00966Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_001028025_03962
Unannotated protein.
  
 
 0.976
GCA_001028025_03358
Unannotated protein.
 
 
 0.829
GCA_001028025_00965
Unannotated protein.
  
 
 0.808
GCA_001028025_01541
Unannotated protein.
    
 0.785
GCA_001028025_00013
Unannotated protein.
  
 
 0.731
GCA_001028025_00683
Unannotated protein.
  
 
 0.731
GCA_001028025_01623
Unannotated protein.
  
 
 0.683
GCA_001028025_00960
Unannotated protein.
  
 
 0.682
GCA_001028025_00714
Unannotated protein.
  
 
 0.675
GCA_001028025_03152
Unannotated protein.
  
 
 0.673
Your Current Organism:
Faecalicatena fissicatena
NCBI taxonomy Id: 290055
Other names: ATCC 33661, DSM 3598, Eubacterium fissicatena, F. fissicatena, JCM 31501, NCIB 10446, NCIB:10446, NCIMB 10446
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.