STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001028025_03664Unannotated protein. (312 aa)    
Predicted Functional Partners:
GCA_001028025_00125
Unannotated protein.
     
 0.956
GCA_001028025_03663
Unannotated protein.
 
     0.903
GCA_001028025_03631
Unannotated protein.
     
 0.887
GCA_001028025_03665
Unannotated protein.
 
     0.880
GCA_001028025_03662
Unannotated protein.
 
     0.865
GCA_001028025_03661
Unannotated protein.
 
     0.861
GCA_001028025_01534
Unannotated protein.
 
     0.793
GCA_001028025_01533
Unannotated protein.
 
     0.784
GCA_001028025_03993
Unannotated protein.
 
     0.784
GCA_001028025_03992
Unannotated protein.
 
     0.776
Your Current Organism:
Faecalicatena fissicatena
NCBI taxonomy Id: 290055
Other names: ATCC 33661, DSM 3598, Eubacterium fissicatena, F. fissicatena, JCM 31501, NCIB 10446, NCIB:10446, NCIMB 10446
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.