STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001028025_03679Unannotated protein. (561 aa)    
Predicted Functional Partners:
GCA_001028025_00021
Unannotated protein.
 
 
 
0.760
GCA_001028025_00020
Unannotated protein.
 
 
 
0.751
GCA_001028025_02771
Unannotated protein.
 
  
 0.707
GCA_001028025_00055
Unannotated protein.
  
 0.647
GCA_001028025_00562
Unannotated protein.
  
 0.631
GCA_001028025_00125
Unannotated protein.
   
 
 0.613
GCA_001028025_00224
Unannotated protein.
  
 0.588
GCA_001028025_03223
Unannotated protein.
 
 
 0.586
GCA_001028025_02761
Unannotated protein.
  
 
  0.556
GCA_001028025_02617
Unannotated protein.
 
     
0.540
Your Current Organism:
Faecalicatena fissicatena
NCBI taxonomy Id: 290055
Other names: ATCC 33661, DSM 3598, Eubacterium fissicatena, F. fissicatena, JCM 31501, NCIB 10446, NCIB:10446, NCIMB 10446
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.