STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_098680Major facilitator superfamily domain, general substrate transporter. (921 aa)    
Predicted Functional Partners:
PENO1_042270
Thioredoxin; Belongs to the thioredoxin family.
  
 0.872
PENO1_101760
Thioredoxin.
   
 0.776
PENO1_061680
Thioredoxin.
   
 0.776
PENO1_022110
Uncharacterized protein.
  
 
 0.723
PENO1_052720
Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily.
   
 0.715
PENO1_099390
Thioredoxin.
   
 0.683
PENO1_075010
XPG/RAD2 endonuclease; Belongs to the protein disulfide isomerase family.
   
 0.683
PENO1_071770
Uncharacterized protein.
   
 0.683
PENO1_082540
Thioredoxin domain-containing protein.
   
 0.683
PENO1_076960
Thioredoxin.
   
 0.683
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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