Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PENO1_001820 | PENO1_004110 | A0A2H3J851 | A0A2H3J4F5 | Nucleic acid-binding, OB-fold. | S15/NS1, RNA-binding. | 0.994 |
PENO1_001820 | PENO1_012940 | A0A2H3J851 | A0A2H3IYQ2 | Nucleic acid-binding, OB-fold. | Double-stranded RNA-binding. | 0.969 |
PENO1_001820 | PENO1_016600 | A0A2H3J851 | A0A2H3J3K6 | Nucleic acid-binding, OB-fold. | Ribosomal protein L28/L40, mitochondrial. | 0.954 |
PENO1_001820 | PENO1_021780 | A0A2H3J851 | A0A2H3IL48 | Nucleic acid-binding, OB-fold. | Ribosomal protein S2, bacteria/mitochondria/plastid. | 0.996 |
PENO1_001820 | PENO1_031950 | A0A2H3J851 | A0A2H3IT59 | Nucleic acid-binding, OB-fold. | Ribosomal protein S5 domain 2-type fold, subgroup; Belongs to the universal ribosomal protein uS5 family. | 0.992 |
PENO1_001820 | PENO1_063470 | A0A2H3J851 | A0A2H3IMW6 | Nucleic acid-binding, OB-fold. | Ribosomal protein S23/S29, mitochondrial. | 0.983 |
PENO1_001820 | PENO1_074150 | A0A2H3J851 | A0A2H3IDP2 | Nucleic acid-binding, OB-fold. | 14-3-3 protein; Belongs to the 14-3-3 family. | 0.461 |
PENO1_001820 | PENO1_096690 | A0A2H3J851 | A0A2H3I0Q4 | Nucleic acid-binding, OB-fold. | Phosphatidylethanolamine-binding protein PEBP. | 0.722 |
PENO1_001820 | PENO1_102710 | A0A2H3J851 | A0A2H3I613 | Nucleic acid-binding, OB-fold. | Ribosomal protein L4/L1e. | 0.995 |
PENO1_001820 | SPB1 | A0A2H3J851 | A0A2H3IVV2 | Nucleic acid-binding, OB-fold. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.556 |
PENO1_004110 | PENO1_001820 | A0A2H3J4F5 | A0A2H3J851 | S15/NS1, RNA-binding. | Nucleic acid-binding, OB-fold. | 0.994 |
PENO1_004110 | PENO1_012940 | A0A2H3J4F5 | A0A2H3IYQ2 | S15/NS1, RNA-binding. | Double-stranded RNA-binding. | 0.969 |
PENO1_004110 | PENO1_016600 | A0A2H3J4F5 | A0A2H3J3K6 | S15/NS1, RNA-binding. | Ribosomal protein L28/L40, mitochondrial. | 0.968 |
PENO1_004110 | PENO1_021780 | A0A2H3J4F5 | A0A2H3IL48 | S15/NS1, RNA-binding. | Ribosomal protein S2, bacteria/mitochondria/plastid. | 0.998 |
PENO1_004110 | PENO1_031950 | A0A2H3J4F5 | A0A2H3IT59 | S15/NS1, RNA-binding. | Ribosomal protein S5 domain 2-type fold, subgroup; Belongs to the universal ribosomal protein uS5 family. | 0.998 |
PENO1_004110 | PENO1_063470 | A0A2H3J4F5 | A0A2H3IMW6 | S15/NS1, RNA-binding. | Ribosomal protein S23/S29, mitochondrial. | 0.996 |
PENO1_004110 | PENO1_096690 | A0A2H3J4F5 | A0A2H3I0Q4 | S15/NS1, RNA-binding. | Phosphatidylethanolamine-binding protein PEBP. | 0.653 |
PENO1_004110 | PENO1_102710 | A0A2H3J4F5 | A0A2H3I613 | S15/NS1, RNA-binding. | Ribosomal protein L4/L1e. | 0.995 |
PENO1_012940 | PENO1_001820 | A0A2H3IYQ2 | A0A2H3J851 | Double-stranded RNA-binding. | Nucleic acid-binding, OB-fold. | 0.969 |
PENO1_012940 | PENO1_004110 | A0A2H3IYQ2 | A0A2H3J4F5 | Double-stranded RNA-binding. | S15/NS1, RNA-binding. | 0.969 |
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