STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_096690Phosphatidylethanolamine-binding protein PEBP. (182 aa)    
Predicted Functional Partners:
PENO1_001820
Nucleic acid-binding, OB-fold.
   
   0.722
PENO1_021780
Ribosomal protein S2, bacteria/mitochondria/plastid.
   
   0.699
PENO1_016600
Ribosomal protein L28/L40, mitochondrial.
   
 
 0.680
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
    
 
 0.671
PENO1_063470
Ribosomal protein S23/S29, mitochondrial.
   
 
 0.668
PENO1_012940
Double-stranded RNA-binding.
   
 
 0.658
PENO1_102710
Ribosomal protein L4/L1e.
   
 
 0.657
PENO1_031950
Ribosomal protein S5 domain 2-type fold, subgroup; Belongs to the universal ribosomal protein uS5 family.
   
   0.654
PENO1_004110
S15/NS1, RNA-binding.
   
   0.653
PENO1_074150
14-3-3 protein; Belongs to the 14-3-3 family.
    
 0.651
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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