STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_097680Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
PENO1_068130
Survival motor neuron.
    
 0.643
PENO1_007460
DNA repair nuclease, XPF-type/Helicase.
    
 0.629
PENO1_023550
DNA polymerase.
    
 0.617
PENO1_052870
Histone-binding protein RBBP4.
    
  0.587
PENO1_088240
DNA repair protein.
    
 0.576
PENO1_065970
ANK_REP_REGION domain-containing protein.
    
  0.573
PENO1_014380
ANK_REP_REGION domain-containing protein.
    
  0.573
PENO1_099310
Small nuclear ribonucleoprotein G.
    
  0.560
PENO1_023130
RanBD1 domain-containing protein.
    
 0.557
PENO1_001030
DNA polymerase delta, subunit 4.
    
 0.555
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.