STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_087840Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
PENO1_004270
Uncharacterized protein.
    
 0.749
PENO1_052870
Histone-binding protein RBBP4.
    
 0.736
PENO1_059230
Winged helix-turn-helix transcription repressor DNA-binding.
    
 
 0.683
PENO1_036000
Uncharacterized protein; Belongs to the actin family.
    
 
 0.683
PENO1_003910
SWIB domain-containing protein.
    
 
 0.681
PENO1_061890
SNF5/SMARCB1/INI1.
    
 
 0.660
PENO1_025380
SNF5/SMARCB1/INI1.
    
 
 0.660
PENO1_110920
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.658
PENO1_059620
Histone deacetylase superfamily.
    
 0.658
PENO1_033020
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.658
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.