STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_084110Ubiquitin fusion degradation protein UFD1. (376 aa)    
Predicted Functional Partners:
PENO1_090330
NPL4, zinc-binding putative.
   
 0.998
PENO1_019070
ATPase, AAA-type, core; Belongs to the AAA ATPase family.
    
 0.993
PENO1_010460
UAS.
    
 0.985
PENO1_038530
Ovarian tumor, otubain.
   
 
 0.971
PENO1_030310
PLAA family ubiquitin binding, PFU.
   
 
 0.971
PENO1_092870
Zinc finger, RING/FYVE/PHD-type.
    
 
 0.970
PENO1_059380
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.969
PENO1_083120
ATPase, AAA-type, core.
    
 0.960
PENO1_001470
Uncharacterized protein.
    
 
 0.947
PENO1_010120
UBX.
   
 
 0.914
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.