STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_083380Methyltranfer_dom domain-containing protein. (362 aa)    
Predicted Functional Partners:
PENO1_038580
Peptide chain release factor class I/class II.
  
 
 0.934
PENO1_023760
Peptide chain release factor class I/class II.
  
 
 0.934
PENO1_070960
Peptide chain release factor eRF1/aRF1.
    
 0.808
PENO1_011290
Coproporphyrinogen III oxidase, aerobic.
   
 
 0.801
PENO1_008840
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.791
PENO1_033340
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.773
PENO1_014480
ATPase, F1 complex, OSCP/delta subunit.
  
   0.674
PENO1_100890
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.662
PENO1_009130
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.662
PENO1_094260
Translation elongation/initiation factor/Ribosomal, beta-barrel.
    
  0.657
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.