STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_079580Homoserine dehydrogenase. (405 aa)    
Predicted Functional Partners:
PENO1_070900
Aspartokinase.
 0.997
PENO1_006800
Homoserine kinase.
  
 0.995
PENO1_100390
Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily.
  
 0.989
PENO1_047690
Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking.
  
 0.982
PENO1_067390
Acetolactate synthase, small subunit.
  
 
 0.979
PENO1_107540
Homocysteine S-methyltransferase.
  
 
 0.959
PENO1_096860
Cobalamin-independent methionine synthase.
   
 
 0.954
PENO1_042100
Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily.
  
 
 0.950
PENO1_017550
Homoserine acetyltransferase.
 
  
 0.950
PENO1_098500
Aminotransferase, class IV.
  
 
 0.948
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.