STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_073600Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
PENO1_027070
Peptidase M43, pregnancy-associated plasma-A.
    
 0.568
PENO1_078540
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
  0.535
PENO1_090890
Tetraspanin/Peripherin.
     
 0.509
PENO1_108690
Uncharacterized protein.
    
  0.446
PENO1_093100
Zinc finger, RING-type.
    
  0.446
PENO1_086600
Uncharacterized protein.
    
  0.446
PENO1_069350
Zinc finger, RING-type.
    
  0.446
PENO1_094150
Zinc finger, RING-type.
    
  0.446
PENO1_023090
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
    
  0.446
PENO1_037940
Zinc finger, RING-type.
    
  0.446
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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