Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PENO1_002240 | PENO1_014380 | A0A2H3J1R1 | A0A2H3IN30 | Zinc finger, PHD-type. | ANK_REP_REGION domain-containing protein. | 0.407 |
PENO1_002240 | PENO1_046080 | A0A2H3J1R1 | A0A2H3IXP2 | Zinc finger, PHD-type. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.730 |
PENO1_002240 | PENO1_065970 | A0A2H3J1R1 | A0A2H3IFV2 | Zinc finger, PHD-type. | ANK_REP_REGION domain-containing protein. | 0.407 |
PENO1_002240 | PENO1_078440 | A0A2H3J1R1 | A0A2H3I6V6 | Zinc finger, PHD-type. | Transcription factor. | 0.560 |
PENO1_012840 | PENO1_014380 | A0A2H3IYP1 | A0A2H3IN30 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | ANK_REP_REGION domain-containing protein. | 0.603 |
PENO1_012840 | PENO1_065970 | A0A2H3IYP1 | A0A2H3IFV2 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | ANK_REP_REGION domain-containing protein. | 0.603 |
PENO1_012840 | PENO1_078440 | A0A2H3IYP1 | A0A2H3I6V6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Transcription factor. | 0.658 |
PENO1_012840 | PENO1_090960 | A0A2H3IYP1 | A0A2H3I923 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | NADH:cytochrome b5 reductase (CBR); Belongs to the cytochrome b5 family. | 0.981 |
PENO1_012840 | PENO1_090970 | A0A2H3IYP1 | A0A2H3IHD4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Eukaryotic molybdopterin oxidoreductase. | 0.982 |
PENO1_014380 | PENO1_002240 | A0A2H3IN30 | A0A2H3J1R1 | ANK_REP_REGION domain-containing protein. | Zinc finger, PHD-type. | 0.407 |
PENO1_014380 | PENO1_012840 | A0A2H3IN30 | A0A2H3IYP1 | ANK_REP_REGION domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.603 |
PENO1_014380 | PENO1_065970 | A0A2H3IN30 | A0A2H3IFV2 | ANK_REP_REGION domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.710 |
PENO1_014380 | PENO1_078440 | A0A2H3IN30 | A0A2H3I6V6 | ANK_REP_REGION domain-containing protein. | Transcription factor. | 0.562 |
PENO1_014380 | PENO1_090960 | A0A2H3IN30 | A0A2H3I923 | ANK_REP_REGION domain-containing protein. | NADH:cytochrome b5 reductase (CBR); Belongs to the cytochrome b5 family. | 0.603 |
PENO1_014380 | PENO1_090970 | A0A2H3IN30 | A0A2H3IHD4 | ANK_REP_REGION domain-containing protein. | Eukaryotic molybdopterin oxidoreductase. | 0.603 |
PENO1_026810 | PENO1_078400 | A0A2H3IJH2 | A0A2H3IIQ6 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Tetratricopeptide-like helical. | 0.841 |
PENO1_026810 | PENO1_078440 | A0A2H3IJH2 | A0A2H3I6V6 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription factor. | 0.551 |
PENO1_046080 | PENO1_002240 | A0A2H3IXP2 | A0A2H3J1R1 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Zinc finger, PHD-type. | 0.730 |
PENO1_046080 | PENO1_078440 | A0A2H3IXP2 | A0A2H3I6V6 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Transcription factor. | 0.562 |
PENO1_065970 | PENO1_002240 | A0A2H3IFV2 | A0A2H3J1R1 | ANK_REP_REGION domain-containing protein. | Zinc finger, PHD-type. | 0.407 |
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