PENO1_071440 protein (Penicillium sp. occitanis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PENO1_071440

Short-chain dehydrogenase/reductase SDR. (239 aa)

Predicted Functional Partners:

PENO1_045110

0.626

PENO1_086470

0.604

PENO1_009710

0.579

PENO1_022290

0.529

PENO1_065970

0.481

PENO1_014380

0.481

PENO1_071520

0.458

PENO1_060000

0.454

PENO1_086490

0.434

Your Current Organism:

Penicillium sp. occitanis

NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PENO1_009710	PENO1_022290	A0A2H3IZG6	A0A2H3IM12	Adrenodoxin.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.837
PENO1_009710	PENO1_060000	A0A2H3IZG6	A0A2H3INQ2	Adrenodoxin.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.915
PENO1_009710	PENO1_071440	A0A2H3IZG6	A0A2H3I730	Adrenodoxin.	Short-chain dehydrogenase/reductase SDR.	0.579
PENO1_014380	PENO1_065970	A0A2H3IN30	A0A2H3IFV2	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.710
PENO1_014380	PENO1_071440	A0A2H3IN30	A0A2H3I730	ANK_REP_REGION domain-containing protein.	Short-chain dehydrogenase/reductase SDR.	0.481
PENO1_022290	PENO1_009710	A0A2H3IM12	A0A2H3IZG6	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Adrenodoxin.	0.837
PENO1_022290	PENO1_045110	A0A2H3IM12	A0A2H3IPK4	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Thiolase-like, subgroup; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.515
PENO1_022290	PENO1_060000	A0A2H3IM12	A0A2H3INQ2	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.495
PENO1_022290	PENO1_071440	A0A2H3IM12	A0A2H3I730	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Short-chain dehydrogenase/reductase SDR.	0.529
PENO1_022290	PENO1_071520	A0A2H3IM12	A0A2H3IN18	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Transcription factor.	0.425
PENO1_045110	PENO1_022290	A0A2H3IPK4	A0A2H3IM12	Thiolase-like, subgroup; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.515
PENO1_045110	PENO1_060000	A0A2H3IPK4	A0A2H3INQ2	Thiolase-like, subgroup; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.996
PENO1_045110	PENO1_071440	A0A2H3IPK4	A0A2H3I730	Thiolase-like, subgroup; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Short-chain dehydrogenase/reductase SDR.	0.626
PENO1_045110	PENO1_086470	A0A2H3IPK4	A0A2H3IGF9	Thiolase-like, subgroup; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Acyl transferase.	0.988
PENO1_060000	PENO1_009710	A0A2H3INQ2	A0A2H3IZG6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Adrenodoxin.	0.915
PENO1_060000	PENO1_022290	A0A2H3INQ2	A0A2H3IM12	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.495
PENO1_060000	PENO1_045110	A0A2H3INQ2	A0A2H3IPK4	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Thiolase-like, subgroup; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.996
PENO1_060000	PENO1_071440	A0A2H3INQ2	A0A2H3I730	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Short-chain dehydrogenase/reductase SDR.	0.454
PENO1_060000	PENO1_071520	A0A2H3INQ2	A0A2H3IN18	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Transcription factor.	0.538
PENO1_060000	PENO1_086470	A0A2H3INQ2	A0A2H3IGF9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Acyl transferase.	0.998