STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_058790Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (2830 aa)    
Predicted Functional Partners:
PENO1_025340
Uncharacterized protein.
   
 
 0.972
PENO1_032220
TGS.
   
 
 0.917
PENO1_027750
Ribosomal protein S15P; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.905
PENO1_011620
K Homology, prokaryotic type; Belongs to the universal ribosomal protein uS3 family.
   
   0.900
PENO1_085620
Ribosomal protein S19, superfamily; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.896
PENO1_054580
Ribosomal protein S5 domain 2-type fold, subgroup; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.891
PENO1_041380
Ribosomal protein S10.
   
   0.887
PENO1_104560
Ribosomal protein S4/S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.885
PENO1_070930
Ribosomal protein L25/L23.
   
   0.879
PENO1_039440
Translation elongation/initiation factor/Ribosomal, beta-barrel; Belongs to the universal ribosomal protein uL3 family.
   
   0.876
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.