STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_057060Ribosomal protein L44e; Belongs to the eukaryotic ribosomal protein eL42 family. (172 aa)    
Predicted Functional Partners:
PENO1_110220
HEAT, type 2.
   
   0.988
PENO1_072490
Armadillo-like helical.
   
   0.988
PENO1_092750
Ribosomal protein L26/L24P, eukaryotic/archaeal.
   
 0.978
PENO1_070930
Ribosomal protein L25/L23.
   
 0.978
PENO1_055940
Ribosomal protein L14.
   
 0.976
PENO1_049620
Ribosomal protein L24e-related.
   
 0.974
PENO1_061910
Ribosomal protein L32e.
   
 0.973
PENO1_061230
Translation elongation/initiation factor/Ribosomal, beta-barrel.
   
 0.973
PENO1_077730
Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.973
PENO1_080800
Ribosomal protein L30e.
   
 0.972
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.