STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_059700Cryptochrome/DNA photolyase, class 1. (1411 aa)    
Predicted Functional Partners:
PENO1_022750
Uncharacterized protein.
    
 0.893
PENO1_027950
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.868
PENO1_060250
Timeless protein.
    
 0.826
PENO1_105840
Uncharacterized protein.
    
 0.628
PENO1_012800
Uncharacterized protein.
    
 0.628
PENO1_047060
Uncharacterized protein.
    
 0.628
PENO1_012790
Kinetochore Sim4 complex subunit Fta4.
    
 0.628
PENO1_067180
SCF E3 ubiquitin ligase complex F-box protein GrrA.
    
 0.602
PENO1_075510
TspO/MBR-related protein.
  
  
 0.599
PENO1_036200
Zinc finger, PHD-type.
    
 0.560
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.