STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_049050Uncharacterized protein. (501 aa)    
Predicted Functional Partners:
PENO1_025290
Glycerophosphoryl diester phosphodiesterase.
    
 0.927
PENO1_021970
Glycerophosphoryl diester phosphodiesterase.
    
 0.803
PENO1_007150
Uncharacterized protein.
    
 0.803
PENO1_047260
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.785
PENO1_078450
DNA ligase.
    
 0.728
PENO1_008850
DNA helicase, ATP-dependent, Ku type.
    
 0.670
PENO1_021430
HRDC domain-containing protein.
    
 0.650
PENO1_045070
DNA ligase.
    
 0.596
PENO1_015600
DNA ligase.
    
 0.596
PENO1_002820
Nucleic acid-binding, OB-fold.
    
 0.596
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.