Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PENO1_002640 | PENO1_041260 | A0A2H3J1V2 | A0A2H3ITY9 | Tetratricopeptide-like helical. | Anaphase-promoting complex subunit 4. | 0.998 |
PENO1_002640 | PENO1_056340 | A0A2H3J1V2 | A0A2H3IB83 | Tetratricopeptide-like helical. | Cullin homology; Belongs to the cullin family. | 0.998 |
PENO1_002640 | PENO1_074930 | A0A2H3J1V2 | A0A2H3IDF6 | Tetratricopeptide-like helical. | Nucleoside phosphorylase. | 0.665 |
PENO1_002640 | PENO1_075700 | A0A2H3J1V2 | A0A2H3IPB1 | Tetratricopeptide-like helical. | Tetratricopeptide-like helical. | 0.998 |
PENO1_002640 | PENO1_077360 | A0A2H3J1V2 | A0A2H3I5S2 | Tetratricopeptide-like helical. | Anaphase-promoting complex subunit 1. | 0.998 |
PENO1_018160 | PENO1_074930 | A0A2H3J5C5 | A0A2H3IDF6 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Nucleoside phosphorylase. | 0.708 |
PENO1_020320 | PENO1_053990 | A0A2H3ILH3 | A0A2H3IT00 | RNA polymerase II accessory factor, Cdc73. | Leo1-like protein. | 0.997 |
PENO1_020320 | PENO1_074930 | A0A2H3ILH3 | A0A2H3IDF6 | RNA polymerase II accessory factor, Cdc73. | Nucleoside phosphorylase. | 0.667 |
PENO1_020320 | PENO1_089420 | A0A2H3ILH3 | A0A2H3I2P5 | RNA polymerase II accessory factor, Cdc73. | RNA polymerase II-associated, Paf1. | 0.997 |
PENO1_041260 | PENO1_002640 | A0A2H3ITY9 | A0A2H3J1V2 | Anaphase-promoting complex subunit 4. | Tetratricopeptide-like helical. | 0.998 |
PENO1_041260 | PENO1_056340 | A0A2H3ITY9 | A0A2H3IB83 | Anaphase-promoting complex subunit 4. | Cullin homology; Belongs to the cullin family. | 0.998 |
PENO1_041260 | PENO1_074930 | A0A2H3ITY9 | A0A2H3IDF6 | Anaphase-promoting complex subunit 4. | Nucleoside phosphorylase. | 0.661 |
PENO1_041260 | PENO1_075700 | A0A2H3ITY9 | A0A2H3IPB1 | Anaphase-promoting complex subunit 4. | Tetratricopeptide-like helical. | 0.998 |
PENO1_041260 | PENO1_077360 | A0A2H3ITY9 | A0A2H3I5S2 | Anaphase-promoting complex subunit 4. | Anaphase-promoting complex subunit 1. | 0.998 |
PENO1_052750 | PENO1_074930 | A0A2H3IDZ2 | A0A2H3IDF6 | Nucleoside diphosphate kinase. | Nucleoside phosphorylase. | 0.585 |
PENO1_053990 | PENO1_020320 | A0A2H3IT00 | A0A2H3ILH3 | Leo1-like protein. | RNA polymerase II accessory factor, Cdc73. | 0.997 |
PENO1_053990 | PENO1_074930 | A0A2H3IT00 | A0A2H3IDF6 | Leo1-like protein. | Nucleoside phosphorylase. | 0.659 |
PENO1_053990 | PENO1_089420 | A0A2H3IT00 | A0A2H3I2P5 | Leo1-like protein. | RNA polymerase II-associated, Paf1. | 0.998 |
PENO1_056340 | PENO1_002640 | A0A2H3IB83 | A0A2H3J1V2 | Cullin homology; Belongs to the cullin family. | Tetratricopeptide-like helical. | 0.998 |
PENO1_056340 | PENO1_041260 | A0A2H3IB83 | A0A2H3ITY9 | Cullin homology; Belongs to the cullin family. | Anaphase-promoting complex subunit 4. | 0.998 |
page 1 of 3