STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_045930Frataxin. (216 aa)    
Predicted Functional Partners:
PENO1_070120
NifU_N domain-containing protein.
    
 0.993
PENO1_071750
Cysteine desulfurase.
   
 0.990
PENO1_008840
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.976
PENO1_057360
Complex 1 LYR protein; Belongs to the complex I LYR family.
    
 0.961
PENO1_043940
Transcription factor.
    
 0.952
PENO1_048260
Aminotransferase, class V/Cysteine desulfurase.
    
 0.860
PENO1_075300
Pyridoxal phosphate-dependent transferase, major region, subdomain 1.
    
 0.845
PENO1_040080
Pyridoxal phosphate-dependent transferase, major region, subdomain 1; Belongs to the type-B carboxylesterase/lipase family.
    
 0.845
PENO1_057350
Uncharacterized protein.
    
 0.819
PENO1_009710
Adrenodoxin.
     
 0.818
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.